Postgraduate taught 

Quantitative Methods in Biodiversity, Conservation & Epidemiology MSc

Fundamentals of programming and data generating processes BIOL5428

  • Academic Session: 2024-25
  • School: School of Biodiversity One Health Vet Med
  • Credits: 20
  • Level: Level 5 (SCQF level 11)
  • Typically Offered: Semester 1
  • Available to Visiting Students: Yes
  • Collaborative Online International Learning: No

Short Description

This course will introduce the students to the fundamental programming skills and how these apply to data generation and simulation, and statistical modelling. Emphasis will be on data simulation and analysis involving generalised linear models, statistical machine learning, and spatial modelling.

Timetable

This course is made up of lectures and practical classes in semester 1.

Excluded Courses

None

Assessment

Students will write submit annotated code and reports generated from small assignments during the course, reflecting participation and competencies learned in practical computer laboratories (50%). These summative assignments will comprise 4 individual grades, each requiring ~500 words commentary in addition to the code (ILOs 1-6

The remaining 50% will be based on an independent assignment (~1000 words in addition to the code) studied during last day of class and completed after the course that will require integration of the evidence-based knowledge and skills learned, involving direct application of programming skills obtained (ILOs 1-6).

Are reassessment opportunities available for all summative assessments? No

Students are offered reassessment in all or any of the components of assessment if the satisfactory (threshold) grade for the overall course is not achieved at the first attempt. This is normally grade C3 for postgraduate students. Exceptionally it may not be possible to offer reassessment of some coursework items, in which case the mark achieved at the first attempt will be counted towards the final course grade. Any such exceptions for this course are described below. 

 

Practicals cannot be reassessed.

Course Aims

The aim of this course is to provide hands-on training in programming techniques focussed on data generating processes; to write comprehensible software that can be understood by other people who examine it; to write reproducible software that can be run by third parties on their own computers without alteration; and to apply those skills to advanced data analysis.

Intended Learning Outcomes of Course

With reference to the evidence base, by the end of this course students will be able to:

1. Use appropriate data structures to retrieve and store information

2. Select and justify the appropriate loops and program structures when solving a problem

3. Document code appropriately to explain program structure, functions, and versioning

4. Design simple computer programs to generate data from random variables, linear and non linear equations

5. Analyse simulated and real-world data with advanced statistical models

6. Generate reports where code output is evaluated and interpretated

Minimum Requirement for Award of Credits

Students must submit at least 75% by weight of the components (including examinations) of the course's summative assessment.